Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010873.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010869.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010868.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010874.1 | |
| CAI8010875.1 | F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA |
| CAI8010876.1 | F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA |
| CAI8010882.1 | NUCLEOTIDE KINASE |
| CAI8010880.1 | NUCLEOTIDE KINASE |
| CAI8010879.1 | NUCLEOTIDE KINASE |
| CAI8010881.1 | NUCLEOTIDE KINASE |
| CAI8010883.1 | NUCLEOTIDE KINASE |
| CAI8010878.1 | NUCLEOTIDE KINASE |
| CAI8010877.1 | NUCLEOTIDE KINASE |
| CAI8010884.1 | NUCLEOTIDE KINASE |
| CAI8010885.1 | |
| CAI8010888.1 | PHOSPHOLIPASE-RELATED |
| CAI8010886.1 | PHOSPHOLIPASE-RELATED |
| CAI8010887.1 | PHOSPHOLIPASE-RELATED |
| CAI8010889.1 | |
| CAI8010892.1 | AMINOMETHYLTRANSFERASE |
| CAI8010893.1 | AMINOMETHYLTRANSFERASE |
| CAI8010890.1 | AMINOMETHYLTRANSFERASE |
| CAI8010891.1 | AMINOMETHYLTRANSFERASE |
| CAI8010894.1 | |
| CAI8010897.1 | LD33804P |
| CAI8010896.1 | LD33804P |
| CAI8010895.1 | LD33804P |
| CAI8010898.1 | |
| CAI8010899.1 | |
| CAI8010900.1 | |
| CAI8010902.1 | BCR-ASSOCIATED PROTEIN, BAP |
| CAI8010901.1 | PHOSPHOLIPASE-RELATED |
| CAI8010903.1 | PHOSPHOLIPASE-RELATED |
| CAI8010904.1 | |
| CAI8010905.1 | BCR-ASSOCIATED PROTEIN, BAP |
| CAI8010910.1 | |
| CAI8010909.1 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| CAI8010911.1 | |
| CAI8010912.1 | |
| CAI8010908.1 | |
| CAI8010907.1 | |
| CAI8010906.1 | |
| CAI8010913.1 | |
| CAI8010916.1 | BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED |
| CAI8010915.1 | BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED |
| CAI8010914.1 | BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED |
| CAI8010917.1 | |
| CAI8010918.1 | |
| CAI8010919.1 | |
| CAI8010920.1 |
