About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 267 268 269 270 271 272 273 274 275 276 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_014638-T1
OS493_014639-T1IP01015P-RELATED
OS493_014640-T1ZINC FINGER PROTEIN
OS493_014641-T1ZINC FINGER PROTEIN ZIC AND GLI
OS493_014642-T1
OS493_014643-T1
OS493_014644-T1DNA REPAIR PROTEIN SWI5 HOMOLOG
OS493_014645-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 151
OS493_014646-T1
OS493_014647-T1G-PROTEIN COUPLED RECEPTOR
OS493_014648-T1
OS493_014649-T1FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN
OS493_014650-T1ATP-DEPENDENT RNA HELICASE
OS493_014651-T1ATP-DEPENDENT RNA HELICASE
OS493_014652-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014653-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014654-T1-
OS493_014655-T1CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
OS493_014656-T1
OS493_014657-T1UNCHARACTERIZED
OS493_014658-T1UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
OS493_014659-T1
OS493_014660-T1FLAP ENDONUCLEASE FAMILY MEMBER
OS493_014661-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_014662-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_014663-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_014664-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_014666-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_014667-T1PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
OS493_014668-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_014669-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_014670-T1
OS493_014671-T1AP1 GAMMA SUBUNIT BINDING PROTEIN 1
OS493_014672-T1AP1 GAMMA SUBUNIT BINDING PROTEIN 1
OS493_014673-T1CENTROMERE PROTEIN W
OS493_014674-T1ZINC FINGERS AND HOMEOBOXES PROTEIN 1, ISOFORM 2
OS493_014675-T1METALLOPROTEASE
OS493_014676-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
OS493_014677-T1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
OS493_014678-T1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
OS493_014679-T1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
OS493_014680-T1ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN
OS493_014681-T1
OS493_014682-T1NETRIN/LAMININ-RELATED
OS493_014683-T1NETRIN/LAMININ-RELATED
OS493_014684-T1NETRIN/LAMININ-RELATED
OS493_014685-T1NUCLEAR PROTEIN E3-3
OS493_014686-T1
OS493_014687-T1NETRIN/LAMININ-RELATED
OS493_014688-T1
TOP