About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58040-
Paelopatides58041REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58042-
Paelopatides58043-
Paelopatides58044BUCENTAUR RELATED
Paelopatides58045B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides58046-
Paelopatides58047-
Paelopatides58048HEXOKINASE
Paelopatides58049ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides58050DUAL SPECIFICITY PROTEIN KINASE
Paelopatides58051BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED
Paelopatides58052WSCD FAMILY MEMBER CG9164
Paelopatides58053NIPSNAP-RELATED
Paelopatides58054ATP DEPENDENT LON PROTEASE FAMILY MEMBER
Paelopatides58055ATP DEPENDENT LON PROTEASE FAMILY MEMBER
Paelopatides58056AMINOMETHYLTRANSFERASE
Paelopatides58057-
Paelopatides58058-
Paelopatides58059-
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