About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57999WD-40 REPEAT PROTEIN
Paelopatides58001ETHANOLAMINEPHOSPHOTRANSFERASE
Paelopatides58002ETHANOLAMINEPHOSPHOTRANSFERASE
Paelopatides58003REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58004-
Paelopatides58005OXYSTEROL-BINDING PROTEIN-RELATED
Paelopatides58006ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides58007-
Paelopatides58008GOLGI SNARE BET1-RELATED
Paelopatides58009-
Paelopatides58010TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X
Paelopatides58011-
Paelopatides58012TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X
Paelopatides58013-
Paelopatides58014FI04643P-RELATED
Paelopatides58015-
Paelopatides58016L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides58017-
Paelopatides58018CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides58019NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
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