About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57907-
Paelopatides57908ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57909G DOMAIN-CONTAINING PROTEIN
Paelopatides57910G DOMAIN-CONTAINING PROTEIN
Paelopatides57911-
Paelopatides57912-
Paelopatides57913G DOMAIN-CONTAINING PROTEIN
Paelopatides57914-
Paelopatides57915-
Paelopatides57916-
Paelopatides57917-
Paelopatides57918SLEI FAMILY PROTEIN
Paelopatides57919-
Paelopatides57920UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides57921-
Paelopatides57922-
Paelopatides57923TRANSPOSON
Paelopatides57924NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides57929HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides57930PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
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