About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57785-
Paelopatides57786-
Paelopatides57787TUBULIN
Paelopatides57788TUBULIN
Paelopatides57789TUBULIN
Paelopatides57790ACYL-COA THIOESTERASE
Paelopatides57791-
Paelopatides57792ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides57793PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides57794ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57795-
Paelopatides57796-
Paelopatides57797CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57798-
Paelopatides57799-
Paelopatides57800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57801-
Paelopatides57802RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS
Paelopatides57803NUCLEAR RECEPTOR BINDING FACTOR 2
Paelopatides57804REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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