About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57764CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57765-
Paelopatides57766FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57767ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57768METALLOPROTEASE INHIBITOR
Paelopatides57769SI:CH211-196P9.1-RELATED
Paelopatides57770FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57771PROTEIN SSUH2 HOMOLOG
Paelopatides57773-
Paelopatides57774LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides57775REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57776-
Paelopatides57777MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Paelopatides57778ZGC:195170
Paelopatides57779REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57780REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57781MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Paelopatides57782MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN
Paelopatides57783FOLLISTATIN-RELATED
Paelopatides57784-
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