About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57722IMPORTIN BETA
Paelopatides57723-
Paelopatides57724PROTEIN DISPATCHED-RELATED
Paelopatides57725-
Paelopatides57726-
Paelopatides57727-
Paelopatides57728PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides57729PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides57730-
Paelopatides57731-
Paelopatides57732-
Paelopatides57733SI:CH211-108C17.2-RELATED-RELATED
Paelopatides57736JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
Paelopatides57737INHIBITOR OF APOPTOSIS
Paelopatides57738INHIBITOR OF APOPTOSIS
Paelopatides57739DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19
Paelopatides57740-
Paelopatides57741-
Paelopatides57742-
Paelopatides57743-
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