About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57595RING FINGER PROTEIN 127
Paelopatides57596BBSOME-INTERACTING PROTEIN 1
Paelopatides57597METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides57598-
Paelopatides57599-
Paelopatides57600-
Paelopatides57601-
Paelopatides57602PROTEIN KISH-A
Paelopatides57603-
Paelopatides57604-
Paelopatides57605CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides57606FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57607FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57608FATTY ACID SYNTHASE
Paelopatides57609FATTY ACID SYNTHASE
Paelopatides57610-
Paelopatides57611INSULIN-INDUCED GENE 1
Paelopatides57612REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57613REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57614RIBOSOMAL PROTEIN L17
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