About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57508-
Paelopatides57509ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides57510ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides57515ENDONUCLEASE
Paelopatides57516-
Paelopatides57517REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57518MITOCHONDRIAL GLYCINE TRANSPORTER
Paelopatides57519-
Paelopatides57520-
Paelopatides57521NETRIN RECEPTOR UNC5
Paelopatides57522-
Paelopatides57523PROTEIN CBG26694
Paelopatides57524ENDONUCLEASE-RELATED
Paelopatides57525ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED
Paelopatides57526UNCHARACTERIZED
Paelopatides57527EPM2A-INTERACTING PROTEIN 1
Paelopatides57528ZINC/IRON TRANSPORTER
Paelopatides57529-
Paelopatides57530-
Paelopatides57531GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
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