About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57385SYNTAXIN
Paelopatides57386PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
Paelopatides57387PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
Paelopatides57388GUANYLYL CYCLASE
Paelopatides57389GUANYLYL CYCLASE
Paelopatides57390SERINE PEPTIDASE S9 FAMILY MEMBER
Paelopatides57391-
Paelopatides57392SERINE/THREONINE-PROTEIN KINASE PIM
Paelopatides57393FI04643P-RELATED
Paelopatides57394-
Paelopatides57395EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7
Paelopatides57396EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7
Paelopatides57397SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides57398LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 LRRC19 FAMILY MEMBER
Paelopatides57399ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57400REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Paelopatides57401PCNA-INTERACTING PARTNER
Paelopatides57402-
Paelopatides57403SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides57404XANTHINE DEHYDROGENASE
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