About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57405-
Paelopatides57406XANTHINE DEHYDROGENASE
Paelopatides57407MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10
Paelopatides57408MACROGLOBULIN / COMPLEMENT
Paelopatides57409-
Paelopatides57410RNA CLEAVAGE STIMULATION FACTOR
Paelopatides57411-
Paelopatides57412-
Paelopatides57413KICSTOR COMPLEX PROTEIN SZT2
Paelopatides57414-
Paelopatides57415-
Paelopatides57416F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57417REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57418POLYCYSTIN-1
Paelopatides57419-
Paelopatides57420POLYCYSTIN-1
Paelopatides57421MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
Paelopatides57422ANION EXCHANGE PROTEIN
Paelopatides57423ANION EXCHANGE PROTEIN
Paelopatides57424-
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