About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57344ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57345-
Paelopatides57346FORKHEAD BOX PROTEIN
Paelopatides57347PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides57348CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7
Paelopatides57349RENIN RECEPTOR
Paelopatides57350NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides57351-
Paelopatides57352-
Paelopatides57353HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides57354PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides57355AAA-FAMILY ATPASE
Paelopatides57356ELONGATION FACTOR 1-GAMMA
Paelopatides57357REVERSE TRANSCRIPTASE
Paelopatides57358-
Paelopatides57359ENDONUCLEASE-RELATED
Paelopatides57360PARANEOPLASTIC ANTIGEN
Paelopatides57361REVERSE TRANSCRIPTASES
Paelopatides57362FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57363-
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