About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57232-
Paelopatides57233TETRATRICOPEPTIDE REPEAT PROTEIN 22
Paelopatides57234-
Paelopatides57235-
Paelopatides57236ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57237PROTEIN CBG26694
Paelopatides57238-
Paelopatides57239ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57240AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides57241STEREOCILIN RELATED
Paelopatides57242PROTEIN CBG26694
Paelopatides57243POL PROTEIN
Paelopatides57244RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides57245-
Paelopatides57246-
Paelopatides57247-
Paelopatides57248ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG
Paelopatides57249PEPTIDASE
Paelopatides57250-
Paelopatides57251SERINE/THREONINE-PROTEIN KINASE KIST
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