About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57171-
Paelopatides57172FIBROBLAST GROWTH FACTOR
Paelopatides57173AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides57174RAD50
Paelopatides57175RAD50
Paelopatides57176-
Paelopatides57177SERINE/THREONINE-PROTEIN KINASE PLK
Paelopatides57178REPETIN
Paelopatides57179CELL DIVISION PROTEIN KINASE
Paelopatides57180DAP3-BINDING CELL DEATH ENHANCER 1
Paelopatides57181ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides57182DAP3-BINDING CELL DEATH ENHANCER 1
Paelopatides57183REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57184-
Paelopatides57185NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides57186-
Paelopatides57187PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides57188WD REPEAT CONTAINING PROTEIN 3 WDR3
Paelopatides57189-
Paelopatides57190-
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