About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57067ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL
Paelopatides57068REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57069-
Paelopatides57070-
Paelopatides57071-
Paelopatides57072DNA POLYMERASE ZETA CATALYTIC SUBUNIT
Paelopatides57073DNA POLYMERASE ZETA CATALYTIC SUBUNIT
Paelopatides57074METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides57075METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides57077PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides57078-
Paelopatides57079-
Paelopatides57080LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides57081-
Paelopatides57082NETRIN/LAMININ-RELATED
Paelopatides57083HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Paelopatides57084FI04643P-RELATED
Paelopatides57085-
Paelopatides57086G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides57087ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
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