About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57088-
Paelopatides57091-
Paelopatides57092-
Paelopatides57093PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
Paelopatides57094-
Paelopatides57095SI:CH211-196P9.1-RELATED
Paelopatides57096-
Paelopatides57097COMPLEXIN
Paelopatides57098PROTEIN CBG26694
Paelopatides57099FIDIPIDINE
Paelopatides57100-
Paelopatides57101REVERSE TRANSCRIPTASES
Paelopatides57102ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides57103PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides57104EXPRESSED PROTEIN
Paelopatides57105ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides57106COUNTIN RECEPTOR CNR3-RELATED
Paelopatides57107METHANETHIOL OXIDASE
Paelopatides57108PROTEIN CBG26694
Paelopatides57109PROTEIN CBG26694
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