About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56966-
Paelopatides56967CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides56968-
Paelopatides56969F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56970NXPE FAMILY MEMBER
Paelopatides56971GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides56972AGAP005574-PA
Paelopatides56973AMINO ACID TRANSPORTER
Paelopatides56974SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides56975FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56976FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56977SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56978-
Paelopatides56979REVERSE TRANSCRIPTASE
Paelopatides56980UNCHARACTERIZED
Paelopatides56981-
Paelopatides56982ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides56983EPM2A-INTERACTING PROTEIN 1
Paelopatides56984-
Paelopatides56985ENDONUCLEASE-RELATED
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