About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56841-
Paelopatides56842EPM2A-INTERACTING PROTEIN 1
Paelopatides56843GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides56844PROTEIN CBG26694
Paelopatides56845EXPRESSED PROTEIN
Paelopatides56846PROTEIN CBG26694
Paelopatides56847L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56848LEUCINE-RICH REPEAT, ISOFORM F-RELATED
Paelopatides56849TRANSPOSASE, PUTATIVE-RELATED
Paelopatides56850-
Paelopatides56851G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
Paelopatides56852-
Paelopatides56853BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Paelopatides56854TESTIS DEVELOPMENT PROTEIN PRTD
Paelopatides56855TESTIS DEVELOPMENT PROTEIN PRTD
Paelopatides56856MORN REPEAT-CONTAINING PROTEIN 4
Paelopatides56857AN1-TYPE ZINC FINGER PROTEIN
Paelopatides56858FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56859PROTEIN CBG26694
Paelopatides56860-
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