About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56801ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56802-
Paelopatides56803-
Paelopatides56804-
Paelopatides56805ZGC:195170
Paelopatides56806REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56807-
Paelopatides56808RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides56809ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56810-
Paelopatides56811IP01015P-RELATED
Paelopatides56812PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides56813-
Paelopatides56815SOLUTE CARRIER FAMILY 40 MEMBER
Paelopatides56816REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56817-
Paelopatides56818PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides56819-
Paelopatides56820RADICAL SAM PROTEINS
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