About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56738-
Paelopatides56739REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56740-
Paelopatides56741ARGININE OR CREATINE KINASE
Paelopatides56742-
Paelopatides56743-
Paelopatides56744CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56745-
Paelopatides56746PHOSPHOLIPASE A2 FAMILY MEMBER
Paelopatides56747-
Paelopatides56748SERINE-THREONINE PROTEIN KINASE
Paelopatides56749HOMEOBOX PROTEIN
Paelopatides56750-
Paelopatides56751RIBOSOMAL PROTEIN L19
Paelopatides56752UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides56753L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56754MULTICOPPER OXIDASE-RELATED
Paelopatides56755-
Paelopatides56756-
Paelopatides56757-
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