About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56779PROTEIN CBG26694
Paelopatides56780-
Paelopatides56781-
Paelopatides56782-
Paelopatides56783WSCD FAMILY MEMBER CG9164
Paelopatides56784-
Paelopatides56785-
Paelopatides56786NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides56787ZGC:195170
Paelopatides56788ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides56789SI:CH211-196P9.1-RELATED
Paelopatides56790FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56791FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56792GAG-RELATED PROTEIN
Paelopatides56793ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56794PROTEIN CBG26694
Paelopatides56795ENZYMATIC POLYPROTEIN-RELATED
Paelopatides56796PROTEIN CBG26694
Paelopatides56797ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides56799NACHT DOMAIN-CONTAINING PROTEIN
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