About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56924EXPRESSED PROTEIN
Paelopatides56925UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Paelopatides56926UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Paelopatides56927CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56928CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56929TESMIN/TSO1-RELATED
Paelopatides56930-
Paelopatides56931-
Paelopatides56932-
Paelopatides56933-
Paelopatides56934RIBOSOMAL PROTEIN S6 KINASE
Paelopatides56935TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Paelopatides56936TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Paelopatides56937BOULE-RELATED
Paelopatides56938-
Paelopatides56939DYNEIN HEAVY CHAIN
Paelopatides56940DYNEIN HEAVY CHAIN
Paelopatides56941-
Paelopatides56942INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides56943TYROSINE-PROTEIN KINASE
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