About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57006-
Paelopatides57007TORSIN-1A-INTERACTING PROTEIN
Paelopatides57008-
Paelopatides57009PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides57010-
Paelopatides57011PROTEIN CBG26694
Paelopatides57012-
Paelopatides57013-
Paelopatides57014PROTEIN CBG26694
Paelopatides57015POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
Paelopatides57016U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10
Paelopatides57017-
Paelopatides57018-
Paelopatides57019D-GLUTAMATE CYCLASE, MITOCHONDRIAL
Paelopatides57020BUCENTAUR RELATED
Paelopatides57021REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57022MEVALONATE KINASE
Paelopatides57023ZINC FINGER PROTEIN ZPR1
Paelopatides57024-
Paelopatides57025-
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