About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57046ENZYMATIC POLYPROTEIN-RELATED
Paelopatides57047-
Paelopatides57048CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides57049REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57050SULFOTRANSFERASE SULT
Paelopatides57051SULFOTRANSFERASE SULT
Paelopatides57052ENZYMATIC POLYPROTEIN-RELATED
Paelopatides57053TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides57054PARANEOPLASTIC ANTIGEN
Paelopatides57055ENDONUCLEASE-RELATED
Paelopatides57056POL PROTEIN
Paelopatides57057POL PROTEIN
Paelopatides57058TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides57059PARANEOPLASTIC ANTIGEN
Paelopatides57060-
Paelopatides57061L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides57063CYTOCHROME C OXIDASE ASSEMBLY FACTOR 6 HOMOLOG
Paelopatides57064SORBITOL DEHYDROGENASE
Paelopatides57065ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides57066ATP-DEPENDENT RNA HELICASE RHLE-RELATED
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