About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57151AMINOPEPTIDASE
Paelopatides57152CHEMOKINE C-C MOTIF RECEPTOR 1
Paelopatides57153-
Paelopatides57154-
Paelopatides57155UNCHARACTERIZED
Paelopatides571564-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER
Paelopatides57157PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides571584-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER
Paelopatides57159PROTEIN CBG26694
Paelopatides57160PROTEIN CBG26694
Paelopatides57161DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides57162TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides57163NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides57164REVERSE TRANSCRIPTASES
Paelopatides57165-
Paelopatides57166PROTEIN LIN-7 HOMOLOG
Paelopatides57167EF HAND DOMAIN FAMILY A1,A2-RELATED
Paelopatides57168EF HAND DOMAIN FAMILY A1,A2-RELATED
Paelopatides57169ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57170-
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