About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57191REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57192SUSHI DOMAIN-CONTAINING PROTEIN
Paelopatides57193PROTEIN CBG26694
Paelopatides57194AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides5719540S RIBOSOMAL PROTEIN S6
Paelopatides57196ANKYRIN REPEAT FAMILY A
Paelopatides57197WD40 REPEAT PROTEIN 12, 37
Paelopatides57198PROGRAMMED CELL DEATH PROTEIN 7
Paelopatides57199ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
Paelopatides57200MOLTING PROTEIN MLT-4
Paelopatides57201SI:CH211-189E2.2
Paelopatides57202ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides57203-
Paelopatides57204-
Paelopatides57205-
Paelopatides57206TUBERIN
Paelopatides57207TUBERIN
Paelopatides57208TUBERIN
Paelopatides57209PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides5721052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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