About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57253-
Paelopatides57254ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57255KREV INTERACTION TRAPPED 1-RELATED
Paelopatides57256-
Paelopatides57257-
Paelopatides57258ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides57259ENDONUCLEASE-RELATED
Paelopatides57260ENDONUCLEASE-RELATED
Paelopatides57261ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides57262ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides57263POL PROTEIN
Paelopatides57264POL PROTEIN
Paelopatides57265-
Paelopatides57266-
Paelopatides57267COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides57273-
Paelopatides57274-
Paelopatides57275PEPTIDASE S8
Paelopatides57278F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57279-
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