About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57211PERIAXIN/AHNAK
Paelopatides57212UPF0183 PROTEIN
Paelopatides57213PROSTAGLANDIN REDUCTASE
Paelopatides57214RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides57215-
Paelopatides57217CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
Paelopatides57218CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
Paelopatides57219-
Paelopatides5722060S RIBOSOMAL PROTEIN L19
Paelopatides57221GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides57222BUCENTAUR RELATED
Paelopatides57223-
Paelopatides57224EXPRESSED PROTEIN
Paelopatides57225-
Paelopatides57226SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides57227PROPERDIN
Paelopatides57228REVERSE TRANSCRIPTASES
Paelopatides57229PROPERDIN
Paelopatides57230TRANSMEMBRANE PROTEIN C9ORF91
Paelopatides57231VESICLE PROTEIN SORTING-ASSOCIATED
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