About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57364GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides57365-
Paelopatides57366-
Paelopatides57367-
Paelopatides57368REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57369PROTEIN CBG26694
Paelopatides57370LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1
Paelopatides57371-
Paelopatides57372TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides57373UNCHARACTERIZED
Paelopatides57374UNCHARACTERIZED
Paelopatides57375SURFEIT LOCUS PROTEIN 2
Paelopatides57376NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
Paelopatides57377MOLTING PROTEIN MLT-4
Paelopatides57379PROTEIN CBG26694
Paelopatides57380-
Paelopatides57381PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides57382-
Paelopatides57383PROTEIN C9ORF135
Paelopatides57384PROTEIN C9ORF135
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