About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57575-
Paelopatides57576-
Paelopatides57577ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides57578ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides57579-
Paelopatides57580-
Paelopatides57581G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides57582-
Paelopatides57583SUSHI DOMAIN-CONTAINING PROTEIN 1
Paelopatides57584INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides57585-
Paelopatides57586TYROSINE-PROTEIN KINASE
Paelopatides57587PLACENTAL PROTEIN 6
Paelopatides57588SELENIDE, WATER DIKINASE
Paelopatides57589ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57590CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides57591PROTEIN CBG26694
Paelopatides57592NUCLEAR HORMONE RECEPTOR
Paelopatides57593REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57594RING FINGER PROTEIN 127
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