About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57637-
Paelopatides57638RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides57639-
Paelopatides57640-
Paelopatides57641TRANSPOSABLE ELEMENT-RELATED
Paelopatides57642-
Paelopatides57643-
Paelopatides57644NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides57645-
Paelopatides57646-
Paelopatides57647GUANIDINOACETATE N-METHYLTRANSFERASE
Paelopatides57648-
Paelopatides57649-
Paelopatides57650RETINOL DEHYDROGENASE
Paelopatides57651RETINOL DEHYDROGENASE
Paelopatides57652-
Paelopatides57653-
Paelopatides57654TRANSMEMBRANE PROTEIN
Paelopatides57655SYNAPTOTAGMIN
Paelopatides57656SNF2/RAD54 FAMILY MEMBER
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