About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57488CELL DIVISION PROTEIN KINASE
Paelopatides57489INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
Paelopatides57490PROTEIN CBG26694
Paelopatides57491RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides57492L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides57493CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57494-
Paelopatides57495TYROSINE-PROTEIN KINASE
Paelopatides57496-
Paelopatides57497-
Paelopatides57498CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides574992-HACID_DH_C DOMAIN-CONTAINING PROTEIN
Paelopatides57500PROTEIN CBG20215-RELATED
Paelopatides575012-HACID_DH_C DOMAIN-CONTAINING PROTEIN
Paelopatides57502SI:CH211-196P9.1-RELATED
Paelopatides57503MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides57504-
Paelopatides57505-
Paelopatides57506-
Paelopatides57507-
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