About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57744BONUS, ISOFORM C-RELATED
Paelopatides57745BONUS, ISOFORM C-RELATED
Paelopatides57746ENZYMATIC POLYPROTEIN-RELATED
Paelopatides57747-
Paelopatides57748UNCHARACTERIZED
Paelopatides57749PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 32
Paelopatides57750-
Paelopatides57751-
Paelopatides57752SEC24-RELATED PROTEIN
Paelopatides57753ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides57754CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57755GNAT FAMILY N-ACETYLTRANSFERASE
Paelopatides57756-
Paelopatides57757FRATAXIN
Paelopatides57758SI:CH211-196P9.1-RELATED
Paelopatides57759-
Paelopatides57760FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57761PROTEIN CBG26694
Paelopatides57762PROTEIN CBG26694
Paelopatides57763-
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