About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57931FI04643P-RELATED
Paelopatides57932CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides57933DYNACTIN SUBUNIT 3
Paelopatides57934ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
Paelopatides57935-
Paelopatides57937-
Paelopatides57938SERINE/ARGININE RICH SPLICING FACTOR
Paelopatides57939-
Paelopatides57940-
Paelopatides57941SPARC OSTEONECTIN
Paelopatides57942POL PROTEIN
Paelopatides57943GLUTATHIONE S-TRANSFERASE
Paelopatides57944-
Paelopatides57945-
Paelopatides57946SI:CH211-243P7.3-RELATED
Paelopatides57947-
Paelopatides57948PROTEIN, PUTATIVE-RELATED
Paelopatides57949VACUOLAR CALCIUM ION TRANSPORTER
Paelopatides57950SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides57951BUCENTAUR RELATED
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