About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58020REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58021NYD-SP28 PROTEIN
Paelopatides58022METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN
Paelopatides58023-
Paelopatides58024NADPH NITROREDUCTASE
Paelopatides58025PPP4R2-RELATED PROTEIN
Paelopatides58026ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides58027G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides58028DED DOMAIN-CONTAINING PROTEIN
Paelopatides58029DED DOMAIN-CONTAINING PROTEIN
Paelopatides58030FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides58031DED DOMAIN-CONTAINING PROTEIN
Paelopatides58032ENDONUCLEASE-RELATED
Paelopatides58033ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58034PROTEIN CBG26694
Paelopatides58035-
Paelopatides58036RETROTRANSPOSON
Paelopatides58037-
Paelopatides58038-
Paelopatides58039SI:CH211-196P9.1-RELATED
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