The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS13301 | INHIBITORY SYNAPTIC FACTOR 2A-RELATED |
HS13302 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
HS13303 | BNIP - RELATED |
HS13304 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
HS13305 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
HS13306 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
HS13307 | TYROSINE-PROTEIN KINASE RECEPTOR |
HS13308 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
HS13309 | INTEGRIN ALPHA |
HS13310 | TRANS-GOLGI PROTEIN GMX33 |
HS13311 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
HS13312 | ATP-DEPENDENT RNA HELICASE |
HS13313 | ATP-DEPENDENT RNA AND DNA HELICASE |
HS13314 | LIPID PHOSPHATE PHOSPHATASE |
HS13315 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS13316 | CHONDROITIN SYNTHASE |
HS13317 | NUCLEOREDOXIN-LIKE PROTEIN 2 |
HS13318 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
HS13319 | |
HS13320 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
HS13321 | EXPRESSED PROTEIN |
HS13322 | COLLAGEN ALPHA |
HS13323 | MYOMEGALIN |
HS13324 | NUCLEOPORIN NUP188 HOMOLOG |
HS13325 | TRANSMEMBRANE PROTEIN 15-RELATED |
HS13326 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
HS13327 | - |
HS13328 | UNCHARACTERIZED |
HS13329 | URIDINE KINASE |
HS13330 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
HS13331 | NETRIN/LAMININ-RELATED |
HS13332 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
HS13333 | MITOGUARDIN |
HS13334 | - |
HS13335 | - |
HS13336 | CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED |
HS13337 | FI04487P |
HS13338 | FI04487P |
HS13339 | ANILLIN/RHOTEKIN RTKN |
HS13340 | RBP-RELATED |
HS13341 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS13342 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
HS13343 | NETRIN RECEPTOR UNC5 |
HS13344 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 10B |
HS13345 | IMPORTIN BETA |
HS13346 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
HS13347 | |
HS13348 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
HS13349 | ANKYRIN REPEAT FAMILY A |
HS13350 | SERINE/ARGININE-RICH SPLICING FACTOR |