The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS13251 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
HS13252 | COLLAGEN ALPHA |
HS13253 | |
HS13254 | |
HS13255 | OLFACTOMEDIN-RELATED |
HS13256 | UNCHARACTERIZED |
HS13257 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
HS13258 | UNCHARACTERIZED |
HS13259 | TUBULIN POLYGLUTAMYLASE |
HS13260 | TUBULIN POLYGLUTAMYLASE |
HS13261 | |
HS13262 | RAS GTPASE-ACTIVATING PROTEINS |
HS13263 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
HS13264 | NETRIN/LAMININ-RELATED |
HS13265 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
HS13266 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
HS13267 | OSMOSIS RESPONSIVE FACTOR |
HS13268 | |
HS13269 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
HS13270 | MITOGEN-ACTIVATED PROTEIN KINASE |
HS13271 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
HS13272 | AF4/FMR2 FAMILY MEMBER |
HS13273 | |
HS13274 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
HS13275 | KELCH PROTEIN |
HS13276 | |
HS13277 | SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE |
HS13278 | HSDA/SDA1-RELATED |
HS13279 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
HS13280 | SUGAR TRANSPORTER |
HS13281 | CELL ADHESION MOLECULE |
HS13282 | TRANSFORMING GROWTH FACTOR ALPHA |
HS13283 | UNCHARACTERIZED |
HS13284 | CRUMBS FAMILY MEMBER |
HS13285 | RGPR-RELATED |
HS13286 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 |
HS13287 | 60S RIBOSOMAL PROTEIN L28 |
HS13288 | PHOSDUCIN-LIKE PROTEIN |
HS13289 | PROSTAGLANDIN G/H SYNTHASE |
HS13290 | 60S RIBOSOMAL PROTEIN L37 |
HS13291 | ALPHA-2,8-SIALYLTRANSFERASE |
HS13292 | PROTEIN CBG12474 |
HS13293 | PROTEIN CBG12474 |
HS13294 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
HS13295 | |
HS13296 | ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL |
HS13297 | |
HS13298 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
HS13299 | THROMBOSPONDIN |
HS13300 | RE48077P |