About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS12951CYTOKINE RECEPTOR
HS12952REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS12953UNCHARACTERIZED
HS12954PROTEIN CBG26694
HS12955GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
HS12956SIGMA 1-TYPE OPIOID RECEPTOR-RELATED
HS12957AAA DOMAIN-CONTAINING
HS129584-NITROPHENYLPHOSPHATASE-RELATED
HS12959
HS12960SMAD
HS12961BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS12962REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS12963EPH RECEPTOR A5
HS12964REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS12965IONOTROPIC GLUTAMATE RECEPTOR
HS12966LIPID PHOSPHATE PHOSPHATASE
HS12967PARALEMMIN-RELATED
HS12968ZGC:174356
HS12969SORTING NEXIN-4
HS12970SOSS COMPLEX SUBUNIT C
HS12971COILED-COIL DOMAIN-CONTAINING PROTEIN 106
HS12972SORTING NEXIN
HS12973MATRIX PROTEIN, PUTATIVE-RELATED
HS12974GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS12975ANTHRAX TOXIN RECEPTOR
HS12976ADIPOR/PROGESTIN RECEPTOR-RELATED
HS12977SULFATE TRANSPORTER
HS12978ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS12979CYTOCHROME P450 26
HS12980DUAL SPECIFICITY PROTEIN PHOSPHATASE
HS12981MOLTING PROTEIN MLT-4
HS12982CLAUDIN
HS12983
HS12984LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
HS12985TGF-BETA FAMILY
HS12986EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN
HS12987ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
HS12988GLIAL FIBRILLARY ACIDIC PROTEIN
HS12989GLIAL FIBRILLARY ACIDIC PROTEIN
HS12990GLIAL FIBRILLARY ACIDIC PROTEIN
HS12991GLIAL FIBRILLARY ACIDIC PROTEIN
HS12992PHOSPHOGLYCERATE MUTASE
HS12993SYNTAXIN
HS12994MATRIX METALLOPROTEINASE
HS12995T-BOX PROTEIN-RELATED
HS12996SH2-SH3 ADAPTOR PROTEIN-RELATED
HS12997COILED-COIL DOMAIN-CONTAINING 74A
HS12998SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
HS12999MATRIX METALLOPROTEINASE
HS13000SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT
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