About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS13451ACTIN-BINDING LIM PROTEIN
HS13452PROTEIN PBDC1
HS13453
HS13454EXPORTIN 4,7-RELATED
HS13455MRNA-CAPPING ENZYME
HS13456MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
HS13457TRANSCRIPTION FACTOR 7 FAMILY MEMBER
HS13458E3 UBIQUITIN-PROTEIN LIGASE MARCH5
HS13459ACTIN
HS13460CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
HS13461CORTACTIN AND DREBRIN
HS1346260S RIBOSOMAL PROTEIN L17
HS13463ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS13464-
HS13465PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
HS13466UNCHARACTERIZED
HS13467TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
HS13468MYOSIN
HS13469CYTOKINE RECEPTOR
HS13470CALCYPHOSIN
HS13471HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
HS13472CERAMIDE GLUCOSYLTRANSFERASE
HS13473MOLYBDOPTERIN SYNTHASE RELATED
HS13474
HS13475ALPHA-MANNOSIDASE
HS13476WD REPEAT-CONTAINING PROTEIN 36
HS13477TB1 PROTEIN-RELATED
HS13478SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
HS13479VACUOLAR ATP SYNTHASE SUBUNIT G
HS13480WD40 REPEAT PROTEIN
HS13481ANAPHASE-PROMOTING COMPLEX SUBUNIT CDC26
HS13482TYROSINE-PROTEIN KINASE
HS13483
HS13484RING FINGER PROTEIN 224
HS13485PHOSPHATIDYLSERINE DECARBOXYLASE
HS13486EMO2-RELATED
HS13487YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
HS13488UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1
HS13489FUKUTIN-RELATED
HS13490ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY
HS13491E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
HS13492TYROSINE-PROTEIN KINASE RECEPTOR
HS13493STANNIOCALCIN
HS13494EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER
HS13495WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
HS13496ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS13497DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
HS13498ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9 ZCCHC9
HS13499DNA REPAIR PROTEIN XRCC4
HS13500AGGRECAN/VERSICAN PROTEOGLYCAN
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