About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55324-
Paelopatides55325-
Paelopatides55326-
Paelopatides55327LEUCOKININ RECEPTOR-RELATED
Paelopatides55328COILED-COIL DOMAIN-CONTAINING PROTEIN 87
Paelopatides55329-
Paelopatides55330-
Paelopatides55331POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
Paelopatides55332REVERSE TRANSCRIPTASES
Paelopatides55333BUCENTAUR RELATED
Paelopatides55340-
Paelopatides55341-
Paelopatides55342ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides55343-
Paelopatides55344L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides55345-
Paelopatides55346-
Paelopatides55348GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides55349GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides55352-
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