About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55353GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT
Paelopatides55354-
Paelopatides55355TRYPTASE-RELATED
Paelopatides55356TRANSMEMBRANE PROTEASE SERINE
Paelopatides55357-
Paelopatides55358-
Paelopatides55359PROTEIN CBG26694
Paelopatides55360-
Paelopatides55361PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides55362ZNF44 PROTEIN
Paelopatides55363-
Paelopatides55364EPM2A-INTERACTING PROTEIN 1
Paelopatides55365ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1
Paelopatides55366G-PROTEIN COUPLED RECEPTOR
Paelopatides55367G-PROTEIN COUPLED RECEPTOR
Paelopatides55368-
Paelopatides55369INTEGRIN BETA-1-BINDING PROTEIN 1
Paelopatides55370PROTEIN CBG20215-RELATED
Paelopatides55371FTP DOMAIN-CONTAINING PROTEIN
Paelopatides55372SI:CH211-108C17.2-RELATED-RELATED
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