About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55242BONUS, ISOFORM C-RELATED
Paelopatides55243BONUS, ISOFORM C-RELATED
Paelopatides55244-
Paelopatides55245BONUS, ISOFORM C-RELATED
Paelopatides55246ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides55247B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides55248ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55249INTEGRIN ALPHA
Paelopatides55250-
Paelopatides55251-
Paelopatides55252ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55253PROTEIN CBG26694
Paelopatides55254PROTEIN CBG26694
Paelopatides55255ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55256-
Paelopatides55257OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides55258PROTEIN CBG26694
Paelopatides55259RETROTRANSPOSON
Paelopatides55260RETROTRANSPOSON
Paelopatides55261PHD-TYPE DOMAIN-CONTAINING PROTEIN
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