About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55142DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides55143PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14
Paelopatides55144-
Paelopatides55145-
Paelopatides55146PROTEIN CBG26694
Paelopatides55147PROTEIN CBG26694
Paelopatides55148-
Paelopatides55149CYTOCHROME P450 508A4-RELATED
Paelopatides55150TETRASPANIN
Paelopatides55151-
Paelopatides55152TETRASPANIN
Paelopatides55153TETRASPANIN
Paelopatides55154TETRASPANIN
Paelopatides55155BCL-2 RELATED
Paelopatides55156ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Paelopatides55157ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Paelopatides55158-
Paelopatides55159PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides55160-
Paelopatides55161EXPRESSED PROTEIN
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