About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55304-
Paelopatides55305HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides55306CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55307CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55308-
Paelopatides55309ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55310SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55311-
Paelopatides55312REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55313MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Paelopatides55314COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Paelopatides55315EXS-RELATED PROTEIN
Paelopatides55316EXS-RELATED PROTEIN
Paelopatides55317F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55318-
Paelopatides55319-
Paelopatides55320-
Paelopatides55321-
Paelopatides55322PROTEIN CBG26694
Paelopatides55323-
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