About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55373AGAP005574-PA
Paelopatides55374INHIBITOR OF APOPTOSIS
Paelopatides55375-
Paelopatides55377FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55378FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55379HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides55380SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides55381DNA2/NAM7 HELICASE FAMILY
Paelopatides55382DNA2/NAM7 HELICASE FAMILY
Paelopatides55383REVERSE TRANSCRIPTASES
Paelopatides55384NUCLEOPORIN AMO1-LIKE
Paelopatides55385DNA2/NAM7 HELICASE FAMILY
Paelopatides55386DNA2/NAM7 HELICASE FAMILY
Paelopatides55387-
Paelopatides55388REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55389REVERSE TRANSCRIPTASES
Paelopatides55390CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED
Paelopatides55391-
Paelopatides55392PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides55393AGAP011099-PA
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