About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55394RETROTRANSPOSON
Paelopatides55395MYOSIN
Paelopatides55396AGAP011099-PA
Paelopatides55397MATRIX PROTEIN, PUTATIVE-RELATED
Paelopatides55398-
Paelopatides55399GAG-RELATED PROTEIN
Paelopatides55400-
Paelopatides55401-
Paelopatides55402EPM2A-INTERACTING PROTEIN 1
Paelopatides55403INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55404PROTEIN CBG26694
Paelopatides55406-
Paelopatides55407MUCOLIPIN
Paelopatides55408PHOSPHOLIPASE A2 FAMILY MEMBER
Paelopatides55409REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55410-
Paelopatides55411CS DOMAIN-CONTAINING PROTEIN
Paelopatides55412-
Paelopatides55413-
Paelopatides55414NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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