About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54529-
Paelopatides54530FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54531-
Paelopatides54532-
Paelopatides54533EXPRESSED PROTEIN
Paelopatides54534REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54535REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54536REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54537-
Paelopatides54538CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54539CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54540CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54543AN1-TYPE ZINC FINGER PROTEIN
Paelopatides54544-
Paelopatides54545FI02073P
Paelopatides54546REVERSE TRANSCRIPTASE
Paelopatides54547-
Paelopatides54548-
Paelopatides54549G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides54550IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
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