About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54444EPM2A-INTERACTING PROTEIN 1
Paelopatides54445-
Paelopatides54446HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Paelopatides54447PROTEIN CBG26694
Paelopatides54448PROTEIN CBG26694
Paelopatides54449-
Paelopatides54450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54451CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54452FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54453FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54454-
Paelopatides54455ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides54456ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides54457PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides54458ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides54459COUNTIN RECEPTOR CNR3-RELATED
Paelopatides54460ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54461ENZYMATIC POLYPROTEIN-RELATED
Paelopatides54462FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54463TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
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