About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54327DYMECLIN
Paelopatides54328DYMECLIN
Paelopatides54329PNAS-3 RELATED
Paelopatides54330PNAS-3 RELATED
Paelopatides54331-
Paelopatides54332F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54336-
Paelopatides54337HEPARANASE
Paelopatides54338-
Paelopatides54339PROTEIN SIDEKICK
Paelopatides54340GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides54341GUANYLYL CYCLASE
Paelopatides54342PROTEIN CBG26694
Paelopatides54343NUCLEAR HORMONE RECEPTOR HR3-RELATED
Paelopatides54344EPM2A-INTERACTING PROTEIN 1
Paelopatides54345PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54346-
Paelopatides54347-
Paelopatides54349FI18240P1-RELATED
Paelopatides54350PROTEIN CBG26694
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